SimPhy is a simulation software for phylogenetics and evolutionary biology.
Varies based on license type
Best BEAST Alternatives ranked by AI · updated May 2025
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Bayesian Evolutionary Analysis by Sampling Trees
Price: Free
Top 3 BEAST alternatives
2
RAxML is a fast and accurate tool for phylogenetic analysis based on maximum likelihood.
Pros
- High performance
- Support for large datasets
Cons
- Command-line interface
- Limited user-friendly features
3
Bayesian inference of phylogeny
Pros
- Efficient Bayesian inference algorithms
- Flexible model specification
Cons
- Command-line interface may not be user-friendly for all
- Limited visualization capabilities
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